Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 FP475955.4-201ENST00000623131 1990 ntBASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SPCS1Q9Y6A9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 AC008741.2-201ENST00000612792 3115 ntBASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SUZ12P1-203ENST00000578195 985 ntBASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SPCS1Q9Y6A9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPCS1Q9Y6A9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 CROCCP2-202ENST00000412962 2773 ntBASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms