Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 AC091390.4-202ENST00000476426 537 ntBASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 NAPSB-206ENST00000562112 1266 ntBASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 AC145285.6-201ENST00000604632 637 ntBASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.34■■□□□ 1.01
COL4A3BPQ9Y5P4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 FAM207BP-201ENST00000447172 505 ntBASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 AC010947.1-201ENST00000623454 693 ntBASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL4A3BPQ9Y5P4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL4A3BPQ9Y5P4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A3BPQ9Y5P4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL4A3BPQ9Y5P4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 CRYGFP-201ENST00000418459 633 ntBASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 SLC25A1P4-201ENST00000567977 778 ntBASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.32■■□□□ 1
COL4A3BPQ9Y5P4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 TEX21P-204ENST00000641479 1693 ntBASIC21.31■■□□□ 1
COL4A3BPQ9Y5P4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 AC141586.3-201ENST00000562166 1838 ntBASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 LINC01568-207ENST00000641790 1380 ntBASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms