Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HRH3Q9Y5N1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 AC092865.7-201ENST00000641832 219 ntBASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.6■□□□□ 0.41
HRH3Q9Y5N1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 AL160286.2-201ENST00000567150 934 ntBASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 AL031985.4-201ENST00000642138 673 ntBASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HRH3Q9Y5N1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HRH3Q9Y5N1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AC091390.4-202ENST00000476426 537 ntBASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 KRT18P35-201ENST00000510488 1269 ntBASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 NAPSB-206ENST00000562112 1266 ntBASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HRH3Q9Y5N1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.57■□□□□ 0.4
HRH3Q9Y5N1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms