Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 AL353719.1-201ENST00000566847 864 ntBASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 MIR4674-201ENST00000582457 87 ntBASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN16Q9Y5I7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 ECEL1P2-202ENST00000465689 757 ntBASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN16Q9Y5I7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 TSPY17P-201ENST00000450329 467 ntBASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 LINC01023-201ENST00000606054 436 ntBASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 AC116562.4-202ENST00000641738 218 ntBASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN16Q9Y5I7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms