Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 AIRN-201ENST00000601203 4374 ntBASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 AC097488.1-201ENST00000507834 756 ntBASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 AC130371.2-201ENST00000619443 611 ntBASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA6Q9Y5G7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 Z82202.1-201ENST00000623446 1880 ntBASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 AC128688.1-201ENST00000487626 519 ntBASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 AP000692.2-201ENST00000608391 879 ntBASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 AC093503.3-201ENST00000624917 2352 ntBASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA6Q9Y5G7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
PCDHGA6Q9Y5G7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms