Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 TEX21P-204ENST00000641479 1693 ntBASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 AC116562.2-201ENST00000507042 360 ntBASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 HLA-A-209ENST00000638375 975 ntBASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB1Q9Y5F3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 NIFKP9-201ENST00000419265 221 ntBASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 AL160286.2-201ENST00000567150 934 ntBASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 NTF6B-201ENST00000591913 560 ntBASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 AC018445.3-201ENST00000624177 1945 ntBASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB1Q9Y5F3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 KSR1P1-201ENST00000446298 240 ntBASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 DUX4L26-201ENST00000489078 1255 ntBASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 KRT16P1-201ENST00000399124 1418 ntBASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
PCDHB1Q9Y5F3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 AC104076.2-201ENST00000448912 469 ntBASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB1Q9Y5F3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 LINC01465-201ENST00000408887 1940 ntBASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms