Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 SPDYE15P-201ENST00000424157 909 ntBASIC19.93■□□□□ 0.78
YIPF1Q9Y548 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.93■□□□□ 0.78
YIPF1Q9Y548 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 STARP1-201ENST00000397973 869 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AL023284.2-201ENST00000405850 579 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AC112907.2-201ENST00000448639 330 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AC125437.2-201ENST00000625180 2167 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 IER3-202ENST00000376377 1350 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 PCDHAC2-203ENST00000615316 3011 ntBASIC19.92■□□□□ 0.78
YIPF1Q9Y548 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YIPF1Q9Y548 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 AC036111.1-201ENST00000533973 1582 ntBASIC19.91■□□□□ 0.78
YIPF1Q9Y548 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 AC083849.1-201ENST00000615227 514 ntBASIC19.91■□□□□ 0.78
YIPF1Q9Y548 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.91■□□□□ 0.78
YIPF1Q9Y548 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 AC005332.1-201ENST00000577698 1310 ntBASIC19.9■□□□□ 0.78
YIPF1Q9Y548 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
YIPF1Q9Y548 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
YIPF1Q9Y548 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms