Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 HLA-A-209ENST00000638375 975 ntBASIC20.85■□□□□ 0.93
L1RE1Q9UN81 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
L1RE1Q9UN81 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 AP003071.4-201ENST00000562276 1284 ntBASIC20.84■□□□□ 0.93
L1RE1Q9UN81 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 KRT16P1-201ENST00000399124 1418 ntBASIC20.84■□□□□ 0.93
L1RE1Q9UN81 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.84■□□□□ 0.93
L1RE1Q9UN81 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AL032819.2-201ENST00000624543 2162 ntBASIC20.83■□□□□ 0.93
L1RE1Q9UN81 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AL355355.2-201ENST00000442321 338 ntBASIC20.83■□□□□ 0.93
L1RE1Q9UN81 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 NUDT16P1-203ENST00000513809 620 ntBASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AL355075.4-201ENST00000554988 638 ntBASIC20.83■□□□□ 0.93
L1RE1Q9UN81 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.83■□□□□ 0.93
L1RE1Q9UN81 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.83■□□□□ 0.92
L1RE1Q9UN81 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
L1RE1Q9UN81 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
L1RE1Q9UN81 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
L1RE1Q9UN81 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
L1RE1Q9UN81 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.82■□□□□ 0.92
L1RE1Q9UN81 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 CROCCP3-202ENST00000420820 1947 ntBASIC20.82■□□□□ 0.92
L1RE1Q9UN81 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
L1RE1Q9UN81 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
L1RE1Q9UN81 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
L1RE1Q9UN81 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
L1RE1Q9UN81 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
L1RE1Q9UN81 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms