Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 AC104076.2-201ENST00000448912 469 ntBASIC20.53■□□□□ 0.88
CNTN3Q9P232 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 AL512604.3-201ENST00000569583 964 ntBASIC20.53■□□□□ 0.88
CNTN3Q9P232 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTN3Q9P232 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTN3Q9P232 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CNTN3Q9P232 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTN3Q9P232 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.52■□□□□ 0.88
CNTN3Q9P232 BX664615.1-201ENST00000443558 458 ntBASIC20.52■□□□□ 0.88
CNTN3Q9P232 MIR4674-201ENST00000582457 87 ntBASIC20.52■□□□□ 0.88
CNTN3Q9P232 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTN3Q9P232 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTN3Q9P232 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTN3Q9P232 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTN3Q9P232 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTN3Q9P232 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 AC008622.2-201ENST00000617006 1229 ntBASIC20.51■□□□□ 0.87
CNTN3Q9P232 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTN3Q9P232 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTN3Q9P232 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 DUX4L26-201ENST00000489078 1255 ntBASIC20.5■□□□□ 0.87
CNTN3Q9P232 AL049597.2-201ENST00000565575 961 ntBASIC20.5■□□□□ 0.87
CNTN3Q9P232 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 AC141257.4-201ENST00000634557 245 ntBASIC20.5■□□□□ 0.87
CNTN3Q9P232 AC136944.6-201ENST00000634818 245 ntBASIC20.5■□□□□ 0.87
CNTN3Q9P232 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 KRT8P45-201ENST00000414328 1447 ntBASIC20.5■□□□□ 0.87
CNTN3Q9P232 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTN3Q9P232 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTN3Q9P232 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTN3Q9P232 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTN3Q9P232 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTN3Q9P232 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTN3Q9P232 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTN3Q9P232 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CNTN3Q9P232 AC141586.3-201ENST00000562166 1838 ntBASIC20.49■□□□□ 0.87
CNTN3Q9P232 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTN3Q9P232 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTN3Q9P232 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CNTN3Q9P232 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CNTN3Q9P232 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms