Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 AC016405.3-201ENST00000607710 860 ntBASIC18.45■□□□□ 0.54
NDE1Q9NXR1 AC110285.6-201ENST00000617652 491 ntBASIC18.45■□□□□ 0.54
NDE1Q9NXR1 AC010536.3-201ENST00000620306 533 ntBASIC18.45■□□□□ 0.54
NDE1Q9NXR1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDE1Q9NXR1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NDE1Q9NXR1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 AC013268.1-206ENST00000638368 961 ntBASIC18.43■□□□□ 0.54
NDE1Q9NXR1 AC112229.1-201ENST00000639295 961 ntBASIC18.43■□□□□ 0.54
NDE1Q9NXR1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDE1Q9NXR1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms