Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 OR10C1-204ENST00000622521 1039 ntBASIC21■□□□□ 0.95
SPTLC3Q9NUV7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 AC124067.4-201ENST00000519691 2379 ntBASIC21■□□□□ 0.95
SPTLC3Q9NUV7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 AL162741.1-201ENST00000565563 1558 ntBASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 AC231657.2-201ENST00000624556 255 ntBASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC3Q9NUV7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 IRX1P1-201ENST00000438849 1838 ntBASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC3Q9NUV7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 AC106820.2-201ENST00000563775 3264 ntBASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 AC141586.5-201ENST00000624546 2050 ntBASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 AC026271.2-201ENST00000428091 497 ntBASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PCDHA12-202ENST00000613593 2588 ntBASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms