Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCM2LQ9NUG4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 AC023632.3-201ENST00000521633 145 ntBASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 AC100791.3-201ENST00000617619 330 ntBASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCM2LQ9NUG4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 MCRIP2P1-201ENST00000394346 511 ntBASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 IRX1P1-201ENST00000438849 1838 ntBASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 AC018553.1-201ENST00000616682 1458 ntBASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.13■□□□□ 0.49
CCM2LQ9NUG4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 AC105020.6-201ENST00000621523 1217 ntBASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCM2LQ9NUG4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms