Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP29Q9HBJ7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AL160286.2-201ENST00000567150 934 ntBASIC19.65■□□□□ 0.74
USP29Q9HBJ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP29Q9HBJ7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.64■□□□□ 0.74
USP29Q9HBJ7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
USP29Q9HBJ7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPY7P-201ENST00000431358 1114 ntBASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 AC004264.1-201ENST00000608354 794 ntBASIC19.64■□□□□ 0.73
USP29Q9HBJ7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USP29Q9HBJ7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP29Q9HBJ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP29Q9HBJ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP29Q9HBJ7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USP29Q9HBJ7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP29Q9HBJ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms