Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.97■■□□□ 1.11
RPAP3Q9H6T3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.97■■□□□ 1.11
RPAP3Q9H6T3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.97■■□□□ 1.11
RPAP3Q9H6T3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP3Q9H6T3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP3Q9H6T3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
RPAP3Q9H6T3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 RASA4DP-201ENST00000460726 1199 ntBASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 AC092597.1-201ENST00000487352 616 ntBASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 AC024243.1-201ENST00000609234 778 ntBASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP3Q9H6T3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 HBZP1-201ENST00000354915 429 ntBASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 DUSP5P1-201ENST00000441325 1139 ntBASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 AL121894.2-201ENST00000602977 491 ntBASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RPAP3Q9H6T3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPAP3Q9H6T3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPAP3Q9H6T3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms