Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RN7SL606P-201ENST00000472779 293 ntBASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 GUSBP12-201ENST00000513727 720 ntBASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 AC002347.1-201ENST00000569543 541 ntBASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 MTDHP5-201ENST00000598980 586 ntBASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 AC036111.1-201ENST00000533973 1582 ntBASIC19.06■□□□□ 0.64
LRFN3Q9BTN0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 Z83851.2-201ENST00000609564 659 ntBASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 AC106028.4-201ENST00000614509 607 ntBASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LRFN3Q9BTN0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN3Q9BTN0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 RNA5SP416-201ENST00000516838 111 ntBASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN3Q9BTN0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN3Q9BTN0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRFN3Q9BTN0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms