Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 BX088651.1-201ENST00000540551 451 ntBASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 CKBP1-201ENST00000565489 1086 ntBASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.77■□□□□ 0.6
CCM2Q9BSQ5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 AC079598.2-202ENST00000546624 1451 ntBASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCM2Q9BSQ5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 CRYGFP-201ENST00000418459 633 ntBASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 TSPY15P-201ENST00000457163 923 ntBASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 AC096733.2-201ENST00000609937 1394 ntBASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2Q9BSQ5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FEM1AP3-201ENST00000403722 1741 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 IRX1P1-201ENST00000438849 1838 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 MFAP1P1-201ENST00000442257 1255 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FITM1-202ENST00000559294 800 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 AP005242.2-201ENST00000580065 1175 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 AP000525.1-201ENST00000608286 694 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 FP475955.4-201ENST00000623131 1990 ntBASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2Q9BSQ5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 MMP23A-201ENST00000234610 1017 ntBASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 AC073912.3-201ENST00000624414 853 ntBASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2Q9BSQ5 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms