Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
FOXC2Q99958 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXC2Q99958 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FOXC2Q99958 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXC2Q99958 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXC2Q99958 PMS2P1-201ENST00000431037 1228 ntBASIC16.05■□□□□ 0.16
FOXC2Q99958 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXC2Q99958 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXC2Q99958 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 KRT18P31-201ENST00000506277 1292 ntBASIC16.05■□□□□ 0.16
FOXC2Q99958 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXC2Q99958 AC012615.1-201ENST00000565797 1299 ntBASIC16.05■□□□□ 0.16
FOXC2Q99958 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXC2Q99958 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXC2Q99958 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXC2Q99958 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXC2Q99958 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 AL162741.1-201ENST00000565563 1558 ntBASIC16.04■□□□□ 0.16
FOXC2Q99958 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
FOXC2Q99958 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXC2Q99958 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 KRT8P11-201ENST00000409686 1436 ntBASIC16.04■□□□□ 0.16
FOXC2Q99958 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXC2Q99958 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
FOXC2Q99958 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXC2Q99958 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
FOXC2Q99958 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXC2Q99958 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXC2Q99958 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXC2Q99958 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXC2Q99958 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXC2Q99958 AP000867.3-201ENST00000524675 377 ntBASIC16.04■□□□□ 0.16
FOXC2Q99958 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXC2Q99958 MIR4674-201ENST00000582457 87 ntBASIC16.04■□□□□ 0.16
FOXC2Q99958 AL121912.1-201ENST00000603683 238 ntBASIC16.04■□□□□ 0.16
FOXC2Q99958 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXC2Q99958 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXC2Q99958 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXC2Q99958 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXC2Q99958 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXC2Q99958 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXC2Q99958 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXC2Q99958 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXC2Q99958 TPSP2-201ENST00000561760 610 ntBASIC16.03■□□□□ 0.16
FOXC2Q99958 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXC2Q99958 AC120114.3-201ENST00000611923 658 ntBASIC16.03■□□□□ 0.16
FOXC2Q99958 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXC2Q99958 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXC2Q99958 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXC2Q99958 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXC2Q99958 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms