Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.02■□□□□ 0.8
SMOQ99835 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.8
SMOQ99835 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SMOQ99835 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.02■□□□□ 0.8
SMOQ99835 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SMOQ99835 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SMOQ99835 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.02■□□□□ 0.8
SMOQ99835 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.02■□□□□ 0.8
SMOQ99835 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.02■□□□□ 0.8
SMOQ99835 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMOQ99835 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMOQ99835 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMOQ99835 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.02■□□□□ 0.79
SMOQ99835 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMOQ99835 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.01■□□□□ 0.79
SMOQ99835 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.01■□□□□ 0.79
SMOQ99835 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.01■□□□□ 0.79
SMOQ99835 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SMOQ99835 HMGA1P5-201ENST00000412453 271 ntBASIC20.01■□□□□ 0.79
SMOQ99835 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.01■□□□□ 0.79
SMOQ99835 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.01■□□□□ 0.79
SMOQ99835 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMOQ99835 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.01■□□□□ 0.79
SMOQ99835 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMOQ99835 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20■□□□□ 0.79
SMOQ99835 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20■□□□□ 0.79
SMOQ99835 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 AL137013.1-201ENST00000432946 1228 ntBASIC20■□□□□ 0.79
SMOQ99835 KRT18P57-201ENST00000443599 1254 ntBASIC20■□□□□ 0.79
SMOQ99835 RN7SL850P-201ENST00000579959 291 ntBASIC20■□□□□ 0.79
SMOQ99835 MIR4674-201ENST00000582457 87 ntBASIC20■□□□□ 0.79
SMOQ99835 FP475955.4-201ENST00000623131 1990 ntBASIC20■□□□□ 0.79
SMOQ99835 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
SMOQ99835 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20■□□□□ 0.79
SMOQ99835 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20■□□□□ 0.79
SMOQ99835 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20■□□□□ 0.79
SMOQ99835 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20■□□□□ 0.79
SMOQ99835 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMOQ99835 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.99■□□□□ 0.79
SMOQ99835 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.99■□□□□ 0.79
SMOQ99835 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.99■□□□□ 0.79
SMOQ99835 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SMOQ99835 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 KRT8P3-201ENST00000519669 1449 ntBASIC19.99■□□□□ 0.79
SMOQ99835 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
SMOQ99835 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMOQ99835 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMOQ99835 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.98■□□□□ 0.79
SMOQ99835 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms