Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC38A3Q99624 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC38A3Q99624 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 TSPY21P-201ENST00000433481 731 ntBASIC18.48■□□□□ 0.55
SLC38A3Q99624 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 WWOX-216ENST00000569818 525 ntBASIC18.48■□□□□ 0.55
SLC38A3Q99624 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC38A3Q99624 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC38A3Q99624 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 RNF152P1-201ENST00000397754 604 ntBASIC18.47■□□□□ 0.55
SLC38A3Q99624 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC38A3Q99624 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC38A3Q99624 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 TSPY23P-201ENST00000440136 739 ntBASIC18.46■□□□□ 0.55
SLC38A3Q99624 YBX1P2-201ENST00000489612 999 ntBASIC18.46■□□□□ 0.55
SLC38A3Q99624 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 AC140113.3-201ENST00000605663 199 ntBASIC18.46■□□□□ 0.55
SLC38A3Q99624 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 AL031432.5-201ENST00000641059 760 ntBASIC18.46■□□□□ 0.55
SLC38A3Q99624 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC38A3Q99624 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC38A3Q99624 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms