Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC073508.3-201ENST00000619697 1419 ntBASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 RN7SL850P-201ENST00000579959 291 ntBASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5RAP1Q96SZ6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP1Q96SZ6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 AL158211.5-201ENST00000623583 2518 ntBASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 TEX21P-204ENST00000641479 1693 ntBASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 AC010203.1-204ENST00000548782 407 ntBASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP1Q96SZ6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 KRT8P3-201ENST00000519669 1449 ntBASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 BX664615.1-201ENST00000443558 458 ntBASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 KRT18P57-201ENST00000443599 1254 ntBASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP1Q96SZ6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.75
CDK5RAP1Q96SZ6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CDK5RAP1Q96SZ6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDK5RAP1Q96SZ6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDK5RAP1Q96SZ6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms