Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL21A1Q96P44 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.02■□□□□ 0.47
COL21A1Q96P44 TEX21P-204ENST00000641479 1693 ntBASIC18.02■□□□□ 0.47
COL21A1Q96P44 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL21A1Q96P44 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
COL21A1Q96P44 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 AL161938.1-201ENST00000569833 2180 ntBASIC18.01■□□□□ 0.47
COL21A1Q96P44 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL21A1Q96P44 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.01■□□□□ 0.47
COL21A1Q96P44 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL21A1Q96P44 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 AC141586.3-201ENST00000562166 1838 ntBASIC18■□□□□ 0.47
COL21A1Q96P44 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
COL21A1Q96P44 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL21A1Q96P44 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL21A1Q96P44 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18■□□□□ 0.47
COL21A1Q96P44 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18■□□□□ 0.47
COL21A1Q96P44 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18■□□□□ 0.47
COL21A1Q96P44 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18■□□□□ 0.47
COL21A1Q96P44 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18■□□□□ 0.47
COL21A1Q96P44 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18■□□□□ 0.47
COL21A1Q96P44 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18■□□□□ 0.47
COL21A1Q96P44 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL21A1Q96P44 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
COL21A1Q96P44 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 UBE2SP1-201ENST00000450587 669 ntBASIC17.99■□□□□ 0.47
COL21A1Q96P44 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
COL21A1Q96P44 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL21A1Q96P44 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms