Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RPRD1AQ96P16 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPRD1AQ96P16 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
RPRD1AQ96P16 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.66■□□□□ 0.74
RPRD1AQ96P16 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 AC116562.4-201ENST00000641316 2276 ntBASIC19.65■□□□□ 0.74
RPRD1AQ96P16 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.65■□□□□ 0.74
RPRD1AQ96P16 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RPRD1AQ96P16 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.64■□□□□ 0.74
RPRD1AQ96P16 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPRD1AQ96P16 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
RPRD1AQ96P16 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.64■□□□□ 0.73
RPRD1AQ96P16 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 AC141586.3-201ENST00000562166 1838 ntBASIC19.64■□□□□ 0.73
RPRD1AQ96P16 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPRD1AQ96P16 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 TSPY14P-201ENST00000303979 915 ntBASIC19.63■□□□□ 0.73
RPRD1AQ96P16 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 EGLN1P1-201ENST00000531623 762 ntBASIC19.63■□□□□ 0.73
RPRD1AQ96P16 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 AC097493.4-201ENST00000641197 219 ntBASIC19.63■□□□□ 0.73
RPRD1AQ96P16 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPRD1AQ96P16 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms