Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 NPAP1P7-201ENST00000613027 823 ntBASIC20.27■□□□□ 0.84
ZNF558Q96NG5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF558Q96NG5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF558Q96NG5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF558Q96NG5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF558Q96NG5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 MIR3180-5-201ENST00000583743 153 ntBASIC20.26■□□□□ 0.83
ZNF558Q96NG5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 AC092119.3-201ENST00000612618 583 ntBASIC20.26■□□□□ 0.83
ZNF558Q96NG5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF558Q96NG5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.25■□□□□ 0.83
ZNF558Q96NG5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF558Q96NG5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ZNF558Q96NG5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 AC011498.5-201ENST00000592027 486 ntBASIC20.23■□□□□ 0.83
ZNF558Q96NG5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF558Q96NG5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF558Q96NG5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms