Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 GCSHP5-201ENST00000443090 522 ntBASIC19.62■□□□□ 0.73
C9orf72Q96LT7 RPS2P52-201ENST00000469610 820 ntBASIC19.62■□□□□ 0.73
C9orf72Q96LT7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 AL390719.1-204ENST00000412397 1219 ntBASIC19.61■□□□□ 0.73
C9orf72Q96LT7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.61■□□□□ 0.73
C9orf72Q96LT7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C9orf72Q96LT7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC090164.3-201ENST00000610780 2143 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC093827.2-201ENST00000512654 315 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC142381.4-202ENST00000563973 229 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 LETM1P2-201ENST00000597330 2178 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 IRX1P1-201ENST00000438849 1838 ntBASIC19.6■□□□□ 0.73
C9orf72Q96LT7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
C9orf72Q96LT7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.59■□□□□ 0.73
C9orf72Q96LT7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 AL390961.4-201ENST00000623958 2535 ntBASIC19.59■□□□□ 0.73
C9orf72Q96LT7 AC135050.7-201ENST00000624508 2218 ntBASIC19.59■□□□□ 0.73
C9orf72Q96LT7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C9orf72Q96LT7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms