Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.6■□□□□ 0.89
SNX27Q96L92 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SNX27Q96L92 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNX27Q96L92 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX27Q96L92 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SNX27Q96L92 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX27Q96L92 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SNX27Q96L92 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX27Q96L92 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX27Q96L92 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX27Q96L92 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNX27Q96L92 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX27Q96L92 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX27Q96L92 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SNX27Q96L92 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.58■□□□□ 0.89
SNX27Q96L92 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
SNX27Q96L92 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
SNX27Q96L92 AL138966.2-201ENST00000621997 464 ntBASIC20.58■□□□□ 0.89
SNX27Q96L92 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX27Q96L92 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.58■□□□□ 0.89
SNX27Q96L92 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SNX27Q96L92 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SNX27Q96L92 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SNX27Q96L92 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.58■□□□□ 0.88
SNX27Q96L92 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX27Q96L92 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SNX27Q96L92 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX27Q96L92 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNX27Q96L92 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX27Q96L92 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX27Q96L92 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX27Q96L92 MIR4674-201ENST00000582457 87 ntBASIC20.57■□□□□ 0.88
SNX27Q96L92 AC006011.2-201ENST00000621313 1158 ntBASIC20.57■□□□□ 0.88
SNX27Q96L92 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX27Q96L92 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX27Q96L92 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX27Q96L92 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX27Q96L92 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX27Q96L92 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNX27Q96L92 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX27Q96L92 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX27Q96L92 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNX27Q96L92 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX27Q96L92 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 DUSP5P1-201ENST00000441325 1139 ntBASIC20.55■□□□□ 0.88
SNX27Q96L92 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.55■□□□□ 0.88
SNX27Q96L92 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX27Q96L92 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SNX27Q96L92 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX27Q96L92 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.55■□□□□ 0.88
SNX27Q96L92 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SNX27Q96L92 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SNX27Q96L92 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNX27Q96L92 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms