Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.17■□□□□ 0.5
ITCHQ96J02 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.17■□□□□ 0.5
ITCHQ96J02 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ITCHQ96J02 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.17■□□□□ 0.5
ITCHQ96J02 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.17■□□□□ 0.5
ITCHQ96J02 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ITCHQ96J02 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 AL512353.2-201ENST00000448759 1962 ntBASIC18.17■□□□□ 0.5
ITCHQ96J02 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ITCHQ96J02 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
ITCHQ96J02 AC009113.1-201ENST00000570267 2443 ntBASIC18.17■□□□□ 0.5
ITCHQ96J02 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITCHQ96J02 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
ITCHQ96J02 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.16■□□□□ 0.5
ITCHQ96J02 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 AC090164.3-201ENST00000610780 2143 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 AC079598.2-202ENST00000546624 1451 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ITCHQ96J02 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 GUSBP6-202ENST00000438529 1198 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.16■□□□□ 0.5
ITCHQ96J02 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
ITCHQ96J02 MYC-209ENST00000641252 345 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ITCHQ96J02 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 BCL2-203ENST00000589955 5011 ntBASIC18.16■□□□□ 0.5
ITCHQ96J02 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ITCHQ96J02 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITCHQ96J02 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.15■□□□□ 0.5
ITCHQ96J02 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.15■□□□□ 0.5
ITCHQ96J02 TSPY6P-201ENST00000448518 926 ntBASIC18.15■□□□□ 0.5
ITCHQ96J02 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.15■□□□□ 0.5
ITCHQ96J02 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ITCHQ96J02 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 AC018470.1-201ENST00000624790 3129 ntBASIC18.15■□□□□ 0.5
ITCHQ96J02 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ITCHQ96J02 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITCHQ96J02 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.14■□□□□ 0.5
ITCHQ96J02 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ITCHQ96J02 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
ITCHQ96J02 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ITCHQ96J02 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
ITCHQ96J02 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ITCHQ96J02 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.14■□□□□ 0.49
ITCHQ96J02 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.14■□□□□ 0.49
ITCHQ96J02 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.14■□□□□ 0.49
ITCHQ96J02 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.14■□□□□ 0.49
ITCHQ96J02 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
ITCHQ96J02 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms