Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.26■□□□□ 0.67
SHDQ96IW2 SEC1P-202ENST00000473944 940 ntBASIC19.26■□□□□ 0.67
SHDQ96IW2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.26■□□□□ 0.67
SHDQ96IW2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SHDQ96IW2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SHDQ96IW2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SHDQ96IW2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.26■□□□□ 0.67
SHDQ96IW2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHDQ96IW2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
SHDQ96IW2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.25■□□□□ 0.67
SHDQ96IW2 AL391807.1-203ENST00000604392 2365 ntBASIC19.25■□□□□ 0.67
SHDQ96IW2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 FOSL1P1-201ENST00000511041 816 ntBASIC19.25■□□□□ 0.67
SHDQ96IW2 AC106795.1-205ENST00000512851 1056 ntBASIC19.25■□□□□ 0.67
SHDQ96IW2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 MIR3917-201ENST00000580971 93 ntBASIC19.25■□□□□ 0.67
SHDQ96IW2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 AC079602.3-201ENST00000623931 403 ntBASIC19.25■□□□□ 0.67
SHDQ96IW2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.25■□□□□ 0.67
SHDQ96IW2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHDQ96IW2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.24■□□□□ 0.67
SHDQ96IW2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHDQ96IW2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SHDQ96IW2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 TOB2P1-201ENST00000469761 992 ntBASIC19.24■□□□□ 0.67
SHDQ96IW2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.24■□□□□ 0.67
SHDQ96IW2 AC104819.1-201ENST00000504587 486 ntBASIC19.24■□□□□ 0.67
SHDQ96IW2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.24■□□□□ 0.67
SHDQ96IW2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.24■□□□□ 0.67
SHDQ96IW2 AL157888.1-201ENST00000631930 593 ntBASIC19.24■□□□□ 0.67
SHDQ96IW2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SHDQ96IW2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHDQ96IW2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SHDQ96IW2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.23■□□□□ 0.67
SHDQ96IW2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.23■□□□□ 0.67
SHDQ96IW2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SHDQ96IW2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.23■□□□□ 0.67
SHDQ96IW2 AC079781.3-201ENST00000449110 356 ntBASIC19.23■□□□□ 0.67
SHDQ96IW2 AC079776.4-201ENST00000511039 504 ntBASIC19.23■□□□□ 0.67
SHDQ96IW2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.23■□□□□ 0.67
SHDQ96IW2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.23■□□□□ 0.67
SHDQ96IW2 AC090616.6-201ENST00000582640 721 ntBASIC19.23■□□□□ 0.67
SHDQ96IW2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.23■□□□□ 0.67
SHDQ96IW2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SHDQ96IW2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.23■□□□□ 0.67
SHDQ96IW2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SHDQ96IW2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SHDQ96IW2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.23■□□□□ 0.67
SHDQ96IW2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms