Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 KRT8P11-201ENST00000409686 1436 ntBASIC16.02■□□□□ 0.16
TIMD4Q96H15 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMD4Q96H15 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMD4Q96H15 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMD4Q96H15 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TIMD4Q96H15 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TIMD4Q96H15 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.02■□□□□ 0.16
TIMD4Q96H15 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TIMD4Q96H15 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TIMD4Q96H15 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TIMD4Q96H15 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TIMD4Q96H15 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.02■□□□□ 0.15
TIMD4Q96H15 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TIMD4Q96H15 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 KRT18P57-201ENST00000443599 1254 ntBASIC16.01■□□□□ 0.15
TIMD4Q96H15 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 AL353719.1-201ENST00000566847 864 ntBASIC16.01■□□□□ 0.15
TIMD4Q96H15 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMD4Q96H15 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TIMD4Q96H15 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
TIMD4Q96H15 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16■□□□□ 0.15
TIMD4Q96H15 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TIMD4Q96H15 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 AC007663.1-201ENST00000438948 1240 ntBASIC16■□□□□ 0.15
TIMD4Q96H15 AL049597.2-201ENST00000565575 961 ntBASIC16■□□□□ 0.15
TIMD4Q96H15 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 AC010331.1-201ENST00000611423 582 ntBASIC16■□□□□ 0.15
TIMD4Q96H15 FAM87A-204ENST00000613235 858 ntBASIC16■□□□□ 0.15
TIMD4Q96H15 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMD4Q96H15 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16■□□□□ 0.15
TIMD4Q96H15 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16■□□□□ 0.15
TIMD4Q96H15 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TIMD4Q96H15 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms