Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPDL1Q96EA4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 AC067852.2-201ENST00000590513 2313 ntBASIC18.77■□□□□ 0.6
SPDL1Q96EA4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 CROCCP3-202ENST00000420820 1947 ntBASIC18.77■□□□□ 0.6
SPDL1Q96EA4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 ZNRF2P3-201ENST00000424200 374 ntBASIC18.77■□□□□ 0.6
SPDL1Q96EA4 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
SPDL1Q96EA4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPDL1Q96EA4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.77■□□□□ 0.59
SPDL1Q96EA4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPDL1Q96EA4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPDL1Q96EA4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 OR6D1P-202ENST00000641007 5290 ntBASIC18.74■□□□□ 0.59
SPDL1Q96EA4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms