Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF25Q96BH1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF25Q96BH1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 AP003097.1-201ENST00000530657 1135 ntBASIC20.03■□□□□ 0.8
RNF25Q96BH1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF25Q96BH1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 AC009113.1-201ENST00000570267 2443 ntBASIC20.03■□□□□ 0.8
RNF25Q96BH1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF25Q96BH1 FP475955.4-201ENST00000623131 1990 ntBASIC20.03■□□□□ 0.8
RNF25Q96BH1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 IRX1P1-201ENST00000438849 1838 ntBASIC20.02■□□□□ 0.8
RNF25Q96BH1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 AC233263.1-201ENST00000578059 224 ntBASIC20.02■□□□□ 0.8
RNF25Q96BH1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 NBPF21P-201ENST00000425093 1451 ntBASIC20.02■□□□□ 0.8
RNF25Q96BH1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF25Q96BH1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF25Q96BH1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF25Q96BH1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF25Q96BH1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF25Q96BH1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RNF25Q96BH1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF25Q96BH1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF25Q96BH1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF25Q96BH1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF25Q96BH1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF25Q96BH1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF25Q96BH1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms