Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 ATP5G1P1-201ENST00000448724 379 ntBASIC20.07■□□□□ 0.8
ATP2A3Q93084 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATP2A3Q93084 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A3Q93084 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 AC087289.5-201ENST00000586076 3175 ntBASIC20.06■□□□□ 0.8
ATP2A3Q93084 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 ECEL1P2-202ENST00000465689 757 ntBASIC20.06■□□□□ 0.8
ATP2A3Q93084 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP2A3Q93084 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A3Q93084 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 AL158211.5-201ENST00000623583 2518 ntBASIC20.05■□□□□ 0.8
ATP2A3Q93084 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 FAM207BP-201ENST00000447172 505 ntBASIC20.05■□□□□ 0.8
ATP2A3Q93084 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 AC010203.1-204ENST00000548782 407 ntBASIC20.05■□□□□ 0.8
ATP2A3Q93084 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A3Q93084 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP2A3Q93084 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 AC018445.3-201ENST00000624177 1945 ntBASIC20.04■□□□□ 0.8
ATP2A3Q93084 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.04■□□□□ 0.8
ATP2A3Q93084 AC096733.2-201ENST00000609937 1394 ntBASIC20.04■□□□□ 0.8
ATP2A3Q93084 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP2A3Q93084 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP2A3Q93084 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A3Q93084 BX323043.1-201ENST00000641006 1765 ntBASIC20.03■□□□□ 0.8
ATP2A3Q93084 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A3Q93084 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A3Q93084 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
ATP2A3Q93084 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP2A3Q93084 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms