Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHC3Q92529 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.36■□□□□ 0.85
SHC3Q92529 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.36■□□□□ 0.85
SHC3Q92529 AC130371.2-201ENST00000619443 611 ntBASIC20.36■□□□□ 0.85
SHC3Q92529 AC083906.6-201ENST00000641366 219 ntBASIC20.36■□□□□ 0.85
SHC3Q92529 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHC3Q92529 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC3Q92529 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.36■□□□□ 0.85
SHC3Q92529 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.36■□□□□ 0.85
SHC3Q92529 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.36■□□□□ 0.85
SHC3Q92529 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHC3Q92529 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
SHC3Q92529 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC3Q92529 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC3Q92529 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC3Q92529 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.35■□□□□ 0.85
SHC3Q92529 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC3Q92529 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 B3GAT3P1-201ENST00000471720 806 ntBASIC20.35■□□□□ 0.85
SHC3Q92529 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.35■□□□□ 0.85
SHC3Q92529 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 AC011298.2-201ENST00000617989 482 ntBASIC20.35■□□□□ 0.85
SHC3Q92529 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.35■□□□□ 0.85
SHC3Q92529 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHC3Q92529 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHC3Q92529 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
SHC3Q92529 RPS2P55-201ENST00000397318 883 ntBASIC20.34■□□□□ 0.85
SHC3Q92529 FAM197Y1-201ENST00000421178 764 ntBASIC20.34■□□□□ 0.85
SHC3Q92529 AC107956.1-201ENST00000494359 873 ntBASIC20.34■□□□□ 0.85
SHC3Q92529 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.34■□□□□ 0.85
SHC3Q92529 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SHC3Q92529 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.34■□□□□ 0.85
SHC3Q92529 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.34■□□□□ 0.85
SHC3Q92529 CD177P1-201ENST00000606252 935 ntBASIC20.34■□□□□ 0.85
SHC3Q92529 MIR6786-201ENST00000616843 113 ntBASIC20.34■□□□□ 0.85
SHC3Q92529 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SHC3Q92529 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC3Q92529 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SHC3Q92529 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC3Q92529 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.33■□□□□ 0.85
SHC3Q92529 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC3Q92529 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SHC3Q92529 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHC3Q92529 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SHC3Q92529 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC3Q92529 AC012618.2-201ENST00000428058 849 ntBASIC20.33■□□□□ 0.85
SHC3Q92529 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.33■□□□□ 0.85
SHC3Q92529 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.33■□□□□ 0.85
SHC3Q92529 AC233702.5-201ENST00000584107 538 ntBASIC20.33■□□□□ 0.85
SHC3Q92529 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHC3Q92529 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
SHC3Q92529 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
SHC3Q92529 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.33■□□□□ 0.84
SHC3Q92529 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC3Q92529 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SHC3Q92529 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.32■□□□□ 0.84
SHC3Q92529 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms