Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 GPR53P-205ENST00000457298 1084 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC012640.2-201ENST00000561606 901 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC051619.7-201ENST00000568314 623 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC125634.1-201ENST00000438758 1403 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 CEND1P1-201ENST00000451006 455 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AL596325.1-201ENST00000563991 1082 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 DUSP8P4-201ENST00000399538 1761 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 HAUS4P1-201ENST00000406739 1145 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 C20orf181-201ENST00000623918 480 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AC233702.3-201ENST00000578656 1387 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AC064836.3-201ENST00000607928 673 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 AC108751.1-201ENST00000490852 363 ntBASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE2Q8WXH0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 ANOS2P-203ENST00000472227 1816 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AP003733.4-201ENST00000623785 1697 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MIR661-201ENST00000384842 89 ntBASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SYNE2Q8WXH0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms