Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.78■□□□□ 0.6
RDH11Q8TC12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.78■□□□□ 0.6
RDH11Q8TC12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.78■□□□□ 0.6
RDH11Q8TC12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 AC007613.1-201ENST00000572811 2597 ntBASIC18.78■□□□□ 0.6
RDH11Q8TC12 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RDH11Q8TC12 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RDH11Q8TC12 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RDH11Q8TC12 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RDH11Q8TC12 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 TSPY6P-201ENST00000448518 926 ntBASIC18.76■□□□□ 0.59
RDH11Q8TC12 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
RDH11Q8TC12 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RDH11Q8TC12 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 GUSBP6-202ENST00000438529 1198 ntBASIC18.75■□□□□ 0.59
RDH11Q8TC12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.75■□□□□ 0.59
RDH11Q8TC12 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RDH11Q8TC12 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RDH11Q8TC12 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
RDH11Q8TC12 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.74■□□□□ 0.59
RDH11Q8TC12 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RDH11Q8TC12 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms