Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH19Q8TAB3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 KRT16P1-201ENST00000399124 1418 ntBASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 SNORA78-201ENST00000459373 127 ntBASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 MIR4497-201ENST00000583208 89 ntBASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 AC073195.1-201ENST00000607241 877 ntBASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 AC120498.9-201ENST00000339021 3867 ntBASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDH19Q8TAB3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 KRT8P11-201ENST00000409686 1436 ntBASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AC091390.4-202ENST00000476426 537 ntBASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 RCC2P6-201ENST00000526625 1557 ntBASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH19Q8TAB3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 AC008040.2-201ENST00000461049 708 ntBASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH19Q8TAB3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms