Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 C2orf69P3-201ENST00000565542 1120 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AP005242.2-201ENST00000580065 1175 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AC092865.7-201ENST00000641832 219 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 KRT8P8-201ENST00000434750 1448 ntBASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AC011298.2-201ENST00000617989 482 ntBASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDND2Q8NHS1 RCC2P6-201ENST00000526625 1557 ntBASIC16.21■□□□□ 0.18
CLDND2Q8NHS1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CLDND2Q8NHS1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDND2Q8NHS1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLDND2Q8NHS1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 AC004951.3-201ENST00000418645 1148 ntBASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 SLC25A1P4-201ENST00000567977 778 ntBASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 NEFHP1-201ENST00000412845 2629 ntBASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDND2Q8NHS1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 AL137013.1-201ENST00000432946 1228 ntBASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 KRT18P57-201ENST00000443599 1254 ntBASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 SLC25A3P1-201ENST00000443844 931 ntBASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 AC130371.2-201ENST00000619443 611 ntBASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDND2Q8NHS1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms