Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 NIFKP9-201ENST00000419265 221 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 AL355355.2-201ENST00000442321 338 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 KRT18P16-201ENST00000510337 1294 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 C1QL1P1-201ENST00000568105 661 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 AC073912.3-201ENST00000624414 853 ntBASIC17.98■□□□□ 0.47
PSD4Q8NDX1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.98■□□□□ 0.47
PSD4Q8NDX1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.97■□□□□ 0.47
PSD4Q8NDX1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.97■□□□□ 0.47
PSD4Q8NDX1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.97■□□□□ 0.47
PSD4Q8NDX1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 AC138932.1-201ENST00000534164 6830 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 AP001271.2-201ENST00000624018 1556 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 KSR1P1-201ENST00000446298 240 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 AP003071.4-201ENST00000562276 1284 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSD4Q8NDX1 TREX1-205ENST00000625293 1783 ntBASIC17.96■□□□□ 0.47
PSD4Q8NDX1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PSD4Q8NDX1 AC093484.2-201ENST00000580996 2166 ntBASIC17.96■□□□□ 0.46
PSD4Q8NDX1 AC106820.2-201ENST00000563775 3264 ntBASIC17.96■□□□□ 0.46
PSD4Q8NDX1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.95■□□□□ 0.46
PSD4Q8NDX1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms