Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPSF7Q8N684 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.64■□□□□ 0.58
CPSF7Q8N684 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CPSF7Q8N684 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AC005332.8-201ENST00000622750 2735 ntBASIC18.64■□□□□ 0.57
CPSF7Q8N684 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 AC008403.3-201ENST00000598924 454 ntBASIC18.64■□□□□ 0.57
CPSF7Q8N684 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPSF7Q8N684 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CPSF7Q8N684 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 NOC2LP2-201ENST00000407594 1944 ntBASIC18.63■□□□□ 0.57
CPSF7Q8N684 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 GCSHP5-201ENST00000443090 522 ntBASIC18.63■□□□□ 0.57
CPSF7Q8N684 AL158047.1-201ENST00000445918 881 ntBASIC18.63■□□□□ 0.57
CPSF7Q8N684 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.63■□□□□ 0.57
CPSF7Q8N684 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPSF7Q8N684 IRX1P1-201ENST00000438849 1838 ntBASIC18.63■□□□□ 0.57
CPSF7Q8N684 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 AC142381.4-202ENST00000563973 229 ntBASIC18.62■□□□□ 0.57
CPSF7Q8N684 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 AC104417.2-201ENST00000562989 1793 ntBASIC18.62■□□□□ 0.57
CPSF7Q8N684 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CPSF7Q8N684 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPSF7Q8N684 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms