Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
DHX40Q8IX18 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.2■□□□□ 0.98
DHX40Q8IX18 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.2■□□□□ 0.98
DHX40Q8IX18 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.2■□□□□ 0.98
DHX40Q8IX18 DUSP5P2-201ENST00000426873 1033 ntBASIC21.2■□□□□ 0.98
DHX40Q8IX18 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
DHX40Q8IX18 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DHX40Q8IX18 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
DHX40Q8IX18 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 ABALON-201ENST00000629058 1903 ntBASIC21.19■□□□□ 0.98
DHX40Q8IX18 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AC126763.1-201ENST00000552015 2118 ntBASIC21.19■□□□□ 0.98
DHX40Q8IX18 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AL121906.2-201ENST00000621597 723 ntBASIC21.19■□□□□ 0.98
DHX40Q8IX18 AC067852.2-201ENST00000590513 2313 ntBASIC21.19■□□□□ 0.98
DHX40Q8IX18 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DHX40Q8IX18 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DHX40Q8IX18 AP000997.3-201ENST00000623333 2250 ntBASIC21.18■□□□□ 0.98
DHX40Q8IX18 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 AC098934.4-201ENST00000564127 592 ntBASIC21.18■□□□□ 0.98
DHX40Q8IX18 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DHX40Q8IX18 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.18■□□□□ 0.98
DHX40Q8IX18 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 MIPEPP3-201ENST00000412105 444 ntBASIC21.17■□□□□ 0.98
DHX40Q8IX18 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DHX40Q8IX18 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms