Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 IL9RP2-201ENST00000423948 1312 ntBASIC27.18■■□□□ 1.94
UBR1Q8IWV7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
UBR1Q8IWV7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 AC133561.1-201ENST00000568600 2415 ntBASIC27.17■■□□□ 1.94
UBR1Q8IWV7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 MIR574-201ENST00000385209 96 ntBASIC27.17■■□□□ 1.94
UBR1Q8IWV7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC27.17■■□□□ 1.94
UBR1Q8IWV7 AC112497.1-201ENST00000624824 639 ntBASIC27.17■■□□□ 1.94
UBR1Q8IWV7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
UBR1Q8IWV7 AC020907.5-201ENST00000624372 1936 ntBASIC27.17■■□□□ 1.94
UBR1Q8IWV7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC27.16■■□□□ 1.94
UBR1Q8IWV7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 AL592071.1-201ENST00000611956 408 ntBASIC27.16■■□□□ 1.94
UBR1Q8IWV7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
UBR1Q8IWV7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 IGHV3-47-201ENST00000425060 335 ntBASIC27.15■■□□□ 1.94
UBR1Q8IWV7 AP001005.1-201ENST00000571755 1248 ntBASIC27.15■■□□□ 1.94
UBR1Q8IWV7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
UBR1Q8IWV7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 MIR7706-201ENST00000613747 67 ntBASIC27.14■■□□□ 1.94
UBR1Q8IWV7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
UBR1Q8IWV7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
UBR1Q8IWV7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
UBR1Q8IWV7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
UBR1Q8IWV7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
UBR1Q8IWV7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 KRT18P13-201ENST00000400056 1290 ntBASIC27.13■■□□□ 1.93
UBR1Q8IWV7 AC010240.3-201ENST00000607688 395 ntBASIC27.13■■□□□ 1.93
UBR1Q8IWV7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
UBR1Q8IWV7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms