Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 FAM207BP-201ENST00000447172 505 ntBASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 TSPY15P-201ENST00000457163 923 ntBASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 KRT8P11-201ENST00000409686 1436 ntBASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 TSPY21P-201ENST00000433481 731 ntBASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 RBM17P1-201ENST00000453646 1190 ntBASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD3Q7Z3D4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 AP000692.2-201ENST00000608391 879 ntBASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD3Q7Z3D4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
LYSMD3Q7Z3D4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
LYSMD3Q7Z3D4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 DGCR10-201ENST00000609839 495 ntBASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 AC026471.1-201ENST00000564629 3026 ntBASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 AC079598.2-202ENST00000546624 1451 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms