Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 RAP2CP1-201ENST00000605103 478 ntBASIC17.24■□□□□ 0.35
SHFQ7M4L6 AL121832.2-201ENST00000610979 668 ntBASIC17.24■□□□□ 0.35
SHFQ7M4L6 IKBKGP1-201ENST00000612193 1073 ntBASIC17.24■□□□□ 0.35
SHFQ7M4L6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SHFQ7M4L6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHFQ7M4L6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 MIPEPP3-201ENST00000412105 444 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 IRX1P1-201ENST00000438849 1838 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 AC124283.5-201ENST00000624661 1809 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 AC093525.10-201ENST00000625130 1569 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
SHFQ7M4L6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHFQ7M4L6 AC104417.2-201ENST00000562989 1793 ntBASIC17.23■□□□□ 0.35
SHFQ7M4L6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.22■□□□□ 0.35
SHFQ7M4L6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHFQ7M4L6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHFQ7M4L6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms