Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 AP000550.4-202ENST00000639755 178 ntBASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC62Q6P9F0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC62Q6P9F0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 AL671277.2-201ENST00000458060 996 ntBASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC62Q6P9F0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 AP000523.1-201ENST00000398242 1049 ntBASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 CR769767.2-201ENST00000622735 460 ntBASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC62Q6P9F0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms