Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HTR7P1-201ENST00000538670 1336 ntBASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF549Q6P9A3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 TSPY21P-201ENST00000433481 731 ntBASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 FAM201B-201ENST00000458407 597 ntBASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 ITM2C-210ENST00000620962 501 ntBASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF549Q6P9A3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 AC004980.1-204ENST00000429707 299 ntBASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 AL359736.2-201ENST00000621992 437 ntBASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF549Q6P9A3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 PRORSD1P-201ENST00000295112 541 ntBASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 AL353708.3-201ENST00000610272 989 ntBASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF549Q6P9A3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF549Q6P9A3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF549Q6P9A3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF549Q6P9A3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF549Q6P9A3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.89■□□□□ 0.62
ZNF549Q6P9A3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms