Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 AC083906.6-201ENST00000641366 219 ntBASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00242Q5T6M2 LTB4R2-202ENST00000528054 3092 ntBASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ABALON-201ENST00000629058 1903 ntBASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 AC006015.1-201ENST00000429970 570 ntBASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00242Q5T6M2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AC005829.2-201ENST00000571422 1056 ntBASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms