Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6CQ53S08 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAB6CQ53S08 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6CQ53S08 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6CQ53S08 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6CQ53S08 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB6CQ53S08 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6CQ53S08 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB6CQ53S08 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6CQ53S08 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 AL020996.1-203ENST00000536896 2307 ntBASIC19.84■□□□□ 0.77
RAB6CQ53S08 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 AL355075.4-201ENST00000554988 638 ntBASIC19.84■□□□□ 0.77
RAB6CQ53S08 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 AP006294.2-201ENST00000641667 209 ntBASIC19.84■□□□□ 0.77
RAB6CQ53S08 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RAB6CQ53S08 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6CQ53S08 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RAB6CQ53S08 CROCCP3-202ENST00000420820 1947 ntBASIC19.83■□□□□ 0.77
RAB6CQ53S08 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RAB6CQ53S08 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB6CQ53S08 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RAB6CQ53S08 AL355355.2-201ENST00000442321 338 ntBASIC19.83■□□□□ 0.77
RAB6CQ53S08 FAM207BP-201ENST00000447172 505 ntBASIC19.83■□□□□ 0.77
RAB6CQ53S08 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB6CQ53S08 AC079598.2-202ENST00000546624 1451 ntBASIC19.83■□□□□ 0.76
RAB6CQ53S08 FSCN1P1-201ENST00000568912 1481 ntBASIC19.83■□□□□ 0.76
RAB6CQ53S08 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RAB6CQ53S08 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
RAB6CQ53S08 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RAB6CQ53S08 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB6CQ53S08 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RAB6CQ53S08 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6CQ53S08 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 MIR718-201ENST00000390190 70 ntBASIC19.82■□□□□ 0.76
RAB6CQ53S08 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 AP000692.2-201ENST00000608391 879 ntBASIC19.82■□□□□ 0.76
RAB6CQ53S08 AP001412.1-201ENST00000608405 714 ntBASIC19.82■□□□□ 0.76
RAB6CQ53S08 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms