Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX4Q33E94 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX4Q33E94 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX4Q33E94 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX4Q33E94 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFX4Q33E94 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 AC116351.2-201ENST00000606540 1585 ntBASIC17.74■□□□□ 0.43
RFX4Q33E94 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 HTR7P1-202ENST00000624664 4411 ntBASIC17.74■□□□□ 0.43
RFX4Q33E94 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RFX4Q33E94 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX4Q33E94 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RFX4Q33E94 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RFX4Q33E94 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RFX4Q33E94 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX4Q33E94 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 AC005181.1-201ENST00000604782 1256 ntBASIC17.74■□□□□ 0.43
RFX4Q33E94 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RFX4Q33E94 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX4Q33E94 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.73■□□□□ 0.43
RFX4Q33E94 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 LSM12P1-201ENST00000411836 588 ntBASIC17.73■□□□□ 0.43
RFX4Q33E94 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 AL162430.1-201ENST00000480705 870 ntBASIC17.73■□□□□ 0.43
RFX4Q33E94 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX4Q33E94 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX4Q33E94 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX4Q33E94 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX4Q33E94 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFX4Q33E94 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX4Q33E94 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX4Q33E94 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFX4Q33E94 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFX4Q33E94 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX4Q33E94 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX4Q33E94 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX4Q33E94 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX4Q33E94 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX4Q33E94 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms