Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 AC116407.4-201ENST00000623319 1061 ntBASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 AC036111.1-201ENST00000533973 1582 ntBASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 AP000523.1-201ENST00000398242 1049 ntBASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SHROOM1Q2M3G4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 AL023284.2-201ENST00000405850 579 ntBASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 AC092597.1-201ENST00000487352 616 ntBASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 AL158211.5-201ENST00000623583 2518 ntBASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHROOM1Q2M3G4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 TSPY21P-201ENST00000433481 731 ntBASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 AL121894.2-201ENST00000602977 491 ntBASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.27■■□□□ 1.16
SHROOM1Q2M3G4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SHROOM1Q2M3G4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 KRT18P56-201ENST00000507275 550 ntBASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 NEK4P2-201ENST00000580004 1012 ntBASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHROOM1Q2M3G4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms