Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RBM3P98179 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.03□□□□□ -0.48
RBM3P98179 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RBM3P98179 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RBM3P98179 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RBM3P98179 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RBM3P98179 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
RBM3P98179 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.02□□□□□ -0.48
RBM3P98179 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.02□□□□□ -0.48
RBM3P98179 SIRPAP1-201ENST00000448467 1770 ntBASIC12.02□□□□□ -0.48
RBM3P98179 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RBM3P98179 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
RBM3P98179 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.48
RBM3P98179 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 TSPY13P-201ENST00000338964 914 ntBASIC12.02□□□□□ -0.49
RBM3P98179 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.02□□□□□ -0.49
RBM3P98179 EEF1DP3-203ENST00000566025 782 ntBASIC12.02□□□□□ -0.49
RBM3P98179 NTF6A-201ENST00000591175 560 ntBASIC12.02□□□□□ -0.49
RBM3P98179 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RBM3P98179 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 AC005224.4-201ENST00000583262 1652 ntBASIC12.02□□□□□ -0.49
RBM3P98179 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RBM3P98179 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.02□□□□□ -0.49
RBM3P98179 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RBM3P98179 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.02□□□□□ -0.49
RBM3P98179 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.02□□□□□ -0.49
RBM3P98179 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RBM3P98179 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RBM3P98179 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RBM3P98179 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.01□□□□□ -0.49
RBM3P98179 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RBM3P98179 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.01□□□□□ -0.49
RBM3P98179 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.01□□□□□ -0.49
RBM3P98179 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
RBM3P98179 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.01□□□□□ -0.49
RBM3P98179 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
RBM3P98179 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RBM3P98179 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms