Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.22■□□□□ 0.67
AP1S1P61966 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.22■□□□□ 0.67
AP1S1P61966 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
AP1S1P61966 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
AP1S1P61966 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.21■□□□□ 0.67
AP1S1P61966 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
AP1S1P61966 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.21■□□□□ 0.67
AP1S1P61966 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.21■□□□□ 0.67
AP1S1P61966 EGLN1P1-201ENST00000531623 762 ntBASIC19.21■□□□□ 0.67
AP1S1P61966 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.21■□□□□ 0.67
AP1S1P61966 AC010947.1-201ENST00000623454 693 ntBASIC19.21■□□□□ 0.67
AP1S1P61966 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 CYP2D8P-201ENST00000433633 1490 ntBASIC19.21■□□□□ 0.67
AP1S1P61966 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S1P61966 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
AP1S1P61966 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
AP1S1P61966 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S1P61966 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.2■□□□□ 0.66
AP1S1P61966 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.2■□□□□ 0.66
AP1S1P61966 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP1S1P61966 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 CCR12P-201ENST00000446203 998 ntBASIC19.2■□□□□ 0.66
AP1S1P61966 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.2■□□□□ 0.66
AP1S1P61966 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.2■□□□□ 0.66
AP1S1P61966 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP1S1P61966 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S1P61966 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.19■□□□□ 0.66
AP1S1P61966 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.19■□□□□ 0.66
AP1S1P61966 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
AP1S1P61966 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.19■□□□□ 0.66
AP1S1P61966 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 AC116562.4-202ENST00000641738 218 ntBASIC19.19■□□□□ 0.66
AP1S1P61966 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
AP1S1P61966 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S1P61966 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.19■□□□□ 0.66
AP1S1P61966 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S1P61966 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.18■□□□□ 0.66
AP1S1P61966 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 TSPY17P-201ENST00000450329 467 ntBASIC19.18■□□□□ 0.66
AP1S1P61966 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
AP1S1P61966 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 AL023803.3-201ENST00000615559 522 ntBASIC19.18■□□□□ 0.66
AP1S1P61966 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.18■□□□□ 0.66
AP1S1P61966 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S1P61966 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
AP1S1P61966 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms